Thanks for the advice, I was thinking that it may be mites but she really doesn't scratch that much so that is confusing me a bit. I also noticed she has an odd smell to her and the flaky skin is a combination of regular dry flakes and thicker, crusty flakes. I will call the vet tomorrow and make an appt. (although with the mood she is in I don't think they will be able to do much with her
)